ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5sdeB2 - ECOD Domain | ECOD

ECOD/Domains/e5sdeB2

e5sdeB2

UID: 002860616

PDB

Range: B:280-571
PDB: 5SDE chain B(all domains)

Molecule: Asp/Glu-specific dipeptidyl-peptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_S46 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupHelical bundle domain in S46 peptidase(6151)

HH-groupHelical bundle domain in S46 peptidase(6151.1)

TT-groupHelical bundle domain in S46 peptidase(6151.1.1)

FFamilyPeptidase_S46(6151.1.1.1)

Ligands

in contact, ≤ 4 Å

5-fluoro-1-[(5-methyl-1,3,4-thiadiazol-2-yl)methyl]-1,2,3,6-tetrahydropyridineU0M

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10459Peptidase_S46

Peptidase S46

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 5SDE RCSB PDB: 5SDE PDBe: 5SDE

Downloads

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