ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5sdhB1 - ECOD Domain | ECOD

ECOD/Domains/e5sdhB1

e5sdhB1

UID: 002860627

PDB

Range: B:23-279,B:572-720
PDB: 5SDH chain B(all domains)

Molecule: Asp/Glu-specific dipeptidyl-peptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_S46 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_S46(1.1.5.28)

Ligands

in contact, ≤ 4 Å

1-[(3-methoxyphenyl)methyl]piperidine-4-carboxamideI81
Chloride ionCL
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10459Peptidase_S46

Peptidase S46

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 5SDH RCSB PDB: 5SDH PDBe: 5SDH

Downloads

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