ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5sdkB2 - ECOD Domain | ECOD

ECOD/Domains/e5sdkB2

e5sdkB2

UID: 002860640

PDB

Range: B:23-279,B:572-720
PDB: 5SDK chain B(all domains)

Molecule: Asp/Glu-specific dipeptidyl-peptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_S46 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_S46(1.1.5.28)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
(2S)-N,2-dimethyl-N-(propan-2-yl)morpholine-4-sulfonamideI87

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10459Peptidase_S46

Peptidase S46

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 5SDK RCSB PDB: 5SDK PDBe: 5SDK

Downloads

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