ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7sfeA1 - ECOD Domain | ECOD

ECOD/Domains/e7sfeA1

e7sfeA1

UID: 002860735

PDB

Range: A:1135-1600
PDB: 7SFE chain A(all domains)

Molecule: DNA (cytosine-5)-methyltransferase 1

3D Structure

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Related Domains

Browse other domains in DNA_methylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyDNA_methylase(2003.1.5.1)

Ligands

in contact, ≤ 4 Å

(2R)-2-{[6-(4-aminopiperidin-1-yl)-3,5-dicyano-4-ethylpyridin-2-yl]amino}-2-phenylacetamide96I
Zinc ionZN
metal

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

GlycerinGOL

Pfam Families

PF00145DNA_methylase

C-5 cytosine-specific DNA methylase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 7SFE RCSB PDB: 7SFE PDBe: 7SFE

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.