ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1zmhB1 - ECOD Domain | ECOD

ECOD/Domains/e1zmhB1

e1zmhB1

UID: 000286647

PDB

Range: B:1-29
PDB: 1ZMH chain B(all domains)
UniProt: P59666 (all domains)
Gene: DEFA3

Molecule: Neutrophil defensin 2

3D Structure

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Related Domains

Browse other domains in Defensin_1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupDefensin-like(383)

HH-groupDefensin-related(383.1)

TT-groupDefensin-related(383.1.1)

FFamilyDefensin_1(383.1.1.1)

Ligands

in contact, ≤ 4 Å

Hexaethylene glycolP6G

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Pfam Families

PF00323Defensin_1

Mammalian defensin

ClanCL0075Defensin

External Links

ECOD PDB View: 1ZMH RCSB PDB: 1ZMH PDBe: 1ZMH UniProt: P59666

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.