ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7va9M1 - ECOD Domain | ECOD

ECOD/Domains/e7va9M1

e7va9M1

UID: 002869354

PDB

Range: M:2-306
PDB: 7VA9 chain M(all domains)

Molecule: Reaction center protein M chain

3D Structure

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Related Domains

Browse other domains in Photo_RC →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBacterial photosystem II reaction centre L and M subunits-like(5037)

HH-groupBacterial photosystem II reaction centre L and M subunits-like(5037.1)

TT-groupBacterial photosystem II reaction centre L and M subunits-like(5037.1.1)

FFamilyPhoto_RC(5037.1.1.1)

Ligands

in contact, ≤ 4 Å

Bacteriochlorophyll ABCL
drugDrugBank DB01853
Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429

Pfam Families

PF00124Photo_RC

Photosynthetic reaction centre protein

External Links

ECOD PDB View: 7VA9 RCSB PDB: 7VA9 PDBe: 7VA9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Ubidecarenone

drugDrugBank DB09270

Bacteriopheophytin bBPB

FE (II) IONFE2

metal

1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEPC1

SpheroideneSPO

Shown in the structure viewer. Drug annotations from DrugDomain.