ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7vnyH1 - ECOD Domain | ECOD

ECOD/Domains/e7vnyH1

e7vnyH1

UID: 002870519

PDB

Range: H:1-35
PDB: 7VNY chain H(all domains)

Molecule: Reaction center protein H chain

3D Structure

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Related Domains

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Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II reaction centre subunit H, transmembrane region(5002)

HH-groupPhotosystem II reaction centre subunit H, transmembrane region(5002.1)

TT-groupPhotosystem II reaction centre subunit H, transmembrane region(5002.1.1)

FFamilyPRCH(5002.1.1.1)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
UbidecarenoneU10
drugDrugBank DB09270within 5 Å only

Pfam Families

Photosynthetic reaction centre, H-chain N-terminal region

ClanCL0350PRC-barrel

External Links

ECOD PDB View: 7VNY RCSB PDB: 7VNY PDBe: 7VNY

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEPC1

Shown in the structure viewer. Drug annotations from DrugDomain.