ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7vxqC3 - ECOD Domain | ECOD

ECOD/Domains/e7vxqC3

e7vxqC3

UID: 002871097

PDB

Range: C:2-37,C:512-552
PDB: 7VXQ chain C(all domains)

Molecule: [NiFe]-hydrogenase 2 large subunit

3D Structure

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Related Domains

Browse other domains in NiFeSe_Hases, HoxH →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4)

TT-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4.1)

FFamilyNiFeSe_Hases, HoxH(244.4.1.3)

Ligands

in contact, ≤ 4 Å

Carbon monoxideCMO
drugDrugBank DB11588
Magnesium ionMG
metal
formyl[bis(hydrocyanato-1kappaC)]ironnickel(Fe-Ni)

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

HoxL-like

External Links

ECOD PDB View: 7VXQ RCSB PDB: 7VXQ PDBe: 7VXQ

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.