ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7yxlA1 - ECOD Domain | ECOD

ECOD/Domains/e7yxlA1

e7yxlA1

UID: 002874950

PDB

Range: A:0-216,A:241-312
PDB: 7YXL chain A(all domains)

Molecule: GH14974p

3D Structure

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Related Domains

Browse other domains in Cupin_8 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyCupin_8(10.12.1.52)

Ligands

in contact, ≤ 4 Å

N-(carboxycarbonyl)-D-phenylalanineNDF
drugDrugBank DB08263
Magnesium ionMG
metal
MANGANESE (II) ION

Pfam Families

PF13621Cupin_8

Cupin-like domain

ClanCL0029Cupin

External Links

ECOD PDB View: 7YXL RCSB PDB: 7YXL PDBe: 7YXL

Downloads

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metal

+ 2 additives (Acetate, 1,2-ETHANEDIOL)

AcetateACT
DrugBank DB14511
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.