ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8a0vB1 - ECOD Domain | ECOD

ECOD/Domains/e8a0vB1

e8a0vB1

UID: 002875629

PDB

Range: B:218-435
PDB: 8A0V chain B(all domains)

Molecule: Transcriptional enhancer factor TEF-5

3D Structure

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Related Domains

Browse other domains in YBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyYBD(11.1.1.230)

Ligands

in contact, ≤ 4 Å

Myristic acidMYR
drugDrugBank DB08231
[(2~{S})-5-chloranyl-2-phenyl-3~{H}-1-benzofuran-2-yl]methanamineKNE

+ 2 additives (Dimethyl sulfoxide, Phosphate ion)

Dimethyl sulfoxide

Pfam Families

YAP binding domain

ClanCL0159E-set

External Links

ECOD PDB View: 8A0V RCSB PDB: 8A0V PDBe: 8A0V

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB01093

Phosphate ionPO4

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.