ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1u3eM1 - ECOD Domain | ECOD

ECOD/Domains/e1u3eM1

e1u3eM1

UID: 000002876

RepresentativePDB

Range: M:106-174
PDB: 1U3E chain M(all domains)
UniProt: P34081 (all domains)

Molecule: HNH homing endonuclease

3D Structure

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Related Domains

Browse other domains in I-HmuI_NUMOD-like →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupDNA-binding domain of intron-encoded endonucleases(101.1.14)

FFamilyI-HmuI_NUMOD-like(101.1.14.2)

Ligands

in contact, ≤ 4 Å

Strontium ionSR
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22083I-HmuI_NUMOD-like

DNA endonuclease I-HmuI-like, NUMOD-like domain

ClanCL0123HTH

External Links

ECOD PDB View: 1U3E RCSB PDB: 1U3E PDBe: 1U3E UniProt: P34081

Downloads

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