ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5bkkC2 - ECOD Domain | ECOD

ECOD/Domains/e5bkkC2

e5bkkC2

UID: 002876076

PDB

Range: C:20-102
PDB: 5BKK chain C(all domains)

Molecule: Calcium-gated potassium channel MthK

3D Structure

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Related Domains

Browse other domains in Ion_trans_2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans_2(5054.1.1.8)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal
(1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl(9Z)-octadec-9-enoatePGW
(~{R})-phenyl-[4-[(tributyl-$l^{4}-azanyl)methyl]phenyl]methanolYQ4

Pfam Families

PF07885Ion_trans_2

Ion channel

ClanCL0030Ion_channel

External Links

ECOD PDB View: 5BKK RCSB PDB: 5BKK PDBe: 5BKK

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.