ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8d1fE1 - ECOD Domain | ECOD

ECOD/Domains/e8d1fE1

e8d1fE1

UID: 002876758

PDB

Range: E:2-377
PDB: 8D1F chain E(all domains)

Molecule: Bestrophin-2

3D Structure

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Related Domains

Browse other domains in Bestrophin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBestrophin(6164)

HH-groupBestrophin(6164.1)

TT-groupBestrophin(6164.1.1)

FFamilyBestrophin(6164.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL
2-[2-[(1~{S},2~{S},4~{S},5'~{R},6~{R},7~{S},8~{R},9~{S},12~{S},13~{R},16~{S})-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icos-18-ene-6,2'-oxane]-16-yl]oxyethyl]propane-1,3-diolDU0

Pfam Families

PF01062Bestrophin

Bestrophin, RFP-TM, chloride channel

ClanCL0897Bestrophin

External Links

ECOD PDB View: 8D1F RCSB PDB: 8D1F PDBe: 8D1F

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINEMC3

Shown in the structure viewer. Drug annotations from DrugDomain.