ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8dqzD2 - ECOD Domain | ECOD

ECOD/Domains/e8dqzD2

e8dqzD2

UID: 002877981

PDB

Range: D:193-261
PDB: 8DQZ chain D(all domains)

Molecule: Replication factor C subunit 2

3D Structure

Loading viewer...

Related Domains

Browse other domains in RCF1-5-like_lid →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupAAA+ ATPase lid domain(148.1.3)

FFamilyRCF1-5-like_lid(148.1.3.42)

Ligands

in contact, ≤ 4 Å

Adenosine 5'-[gamma-thio]triphosphateAGS
drugDrugBank DB02930
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

PF21960RCF1-5-like_lid

RCF1/5-like, AAA+ ATPase lid domain

ClanCL0671AAA_lid

External Links

ECOD PDB View: 8DQZ RCSB PDB: 8DQZ PDBe: 8DQZ

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.