ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8dr4C3 - ECOD Domain | ECOD

ECOD/Domains/e8dr4C3

e8dr4C3

UID: 002878061

PDB

Range: C:168-236
PDB: 8DR4 chain C(all domains)

Molecule: Replication factor C subunit 3

3D Structure

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Related Domains

Browse other domains in AAA_lid_RFC1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupAAA+ ATPase lid domain(148.1.3)

FFamilyAAA_lid_RFC1(148.1.3.173)

Ligands

in contact, ≤ 4 Å

Adenosine 5'-[gamma-thio]triphosphateAGS
drugDrugBank DB02930
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

PF25361AAA_lid_RFC1

RFC1-like, AAA+ ATPase lid domain

ClanCL0671AAA_lid

External Links

ECOD PDB View: 8DR4 RCSB PDB: 8DR4 PDBe: 8DR4

Downloads

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Drug annotations from DrugDomain.