ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8dr4D1 - ECOD Domain | ECOD

ECOD/Domains/e8dr4D1

e8dr4D1

UID: 002878062

PDB

Range: D:193-262
PDB: 8DR4 chain D(all domains)

Molecule: Replication factor C subunit 2

3D Structure

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Related Domains

Browse other domains in RCF1-5-like_lid →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupAAA+ ATPase lid domain(148.1.3)

FFamilyRCF1-5-like_lid(148.1.3.42)

Ligands

in contact, ≤ 4 Å

Adenosine 5'-[gamma-thio]triphosphateAGS
drugDrugBank DB02930
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

PF21960RCF1-5-like_lid

RCF1/5-like, AAA+ ATPase lid domain

ClanCL0671AAA_lid

External Links

ECOD PDB View: 8DR4 RCSB PDB: 8DR4 PDBe: 8DR4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.