ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7f9vA2 - ECOD Domain | ECOD

ECOD/Domains/e7f9vA2

e7f9vA2

UID: 002879163

PDB

Range: A:600-719
PDB: 7F9V chain A(all domains)

Molecule: Prolyl-tRNA synthetase (ProRS)

3D Structure

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Related Domains

Browse other domains in HGTP_anticodon →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupAnticodon-binding domain of Class II aaRS(7502)

HH-groupAnticodon-binding domain of Class II aaRS(7502.1)

TT-groupAnticodon-binding domain of Class II aaRS(7502.1.1)

FFamilyHGTP_anticodon(7502.1.1.1)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
Fluoride ionF
Iodide ionIOD
within 5 Å only

Pfam Families

PF03129HGTP_anticodon

Anticodon binding domain

ClanCL0458IIaaRS-ABD

External Links

ECOD PDB View: 7F9V RCSB PDB: 7F9V PDBe: 7F9V

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.