ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7f9vB2 - ECOD Domain | ECOD

ECOD/Domains/e7f9vB2

e7f9vB2

UID: 002879166

PDB

Range: B:720-830
PDB: 7F9V chain B(all domains)

Molecule: Prolyl-tRNA synthetase (ProRS)

3D Structure

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Related Domains

Browse other domains in ProRS-C_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupIF3-like(328)

HH-groupC-terminal domain of ProRS(328.2)

TT-groupC-terminal domain of ProRS(328.2.1)

FFamilyProRS-C_1(328.2.1.1)

Ligands

in contact, ≤ 4 Å

Iodide ionIOD
4-[(3S)-3-cyano-3-(1-methylcyclopropyl)-2-oxidanylidene-pyrrolidin-1-yl]-N-[[3-fluoranyl-5-(1-methylpyrazol-4-yl)phenyl]methyl]-6-methyl-pyridine-2-carboxamide1TI
within 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

PF09180ProRS-C_1

Prolyl-tRNA synthetase, C-terminal

External Links

ECOD PDB View: 7F9V RCSB PDB: 7F9V PDBe: 7F9V

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.