ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7pbqD3 - ECOD Domain | ECOD

ECOD/Domains/e7pbqD3

e7pbqD3

UID: 002882047

PDB

Range: D:180-254
PDB: 7PBQ chain D(all domains)

Molecule: Holliday junction ATP-dependent DNA helicase RuvB

3D Structure

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Related Domains

Browse other domains in AAA_lid_4 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupAAA+ ATPase lid domain(148.1.3)

FFamilyAAA_lid_4(148.1.3.21)

Ligands

in contact, ≤ 4 Å

Adenosine 5'-[gamma-thio]triphosphateAGS
drugDrugBank DB02930
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

PF17864AAA_lid_4

RuvB AAA lid domain

ClanCL0671AAA_lid

External Links

ECOD PDB View: 7PBQ RCSB PDB: 7PBQ PDBe: 7PBQ

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.