ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e7pbsC3 - ECOD Domain | ECOD

ECOD/Domains/e7pbsC3

e7pbsC3

UID: 002882081

PDB

Range: C:19-179
PDB: 7PBS chain C(all domains)

Molecule: Holliday junction ATP-dependent DNA helicase RuvB

3D Structure

Loading viewer...

Related Domains

Browse other domains in RuvB_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRuvB_N(2004.1.1.125)

Ligands

in contact, ≤ 4 Å

Adenosine 5'-[gamma-thio]triphosphateAGS
drugDrugBank DB02930
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Holliday junction DNA helicase RuvB P-loop domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 7PBS RCSB PDB: 7PBS PDBe: 7PBS

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure