ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7pgaA2 - ECOD Domain | ECOD

ECOD/Domains/e7pgaA2

e7pgaA2

UID: 002882602

PDB

Range: A:99-354
PDB: 7PGA chain A(all domains)

Molecule: Carminomycin 4-O-methyltransferase DnrK,Methyltransferase domain-containing protein,Aclacinomycin 10-hydroxylase RdmB

3D Structure

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Related Domains

Browse other domains in Methyltransf_2, Methyltransf_25 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_2, Methyltransf_25(2003.1.5.163)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
methyl (1R,2R,4S)-2-ethyl-2,4,5,7-tetrahydroxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracene-1-carboxylateVAK

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00891Methyltransf_2

O-methyltransferase domain

ClanCL0063NADP_Rossmann

PF13649Methyltransf_25

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 7PGA RCSB PDB: 7PGA PDBe: 7PGA

Downloads

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