ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xpiB1 - ECOD Domain | ECOD

ECOD/Domains/e1xpiB1

e1xpiB1

UID: 000288626

PDB

Range: B:89-317
PDB: 1XPI chain B(all domains)
UniProt: P0AA39 (all domains)
Gene: rluC

Molecule: Ribosomal large subunit pseudouridine synthase C

3D Structure

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Related Domains

Browse other domains in PseudoU_synth_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyPseudoU_synth_2(304.102.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Acetic acid)

Acetic acidACY
DrugBank DB03166

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00849PseudoU_synth_2

RNA pseudouridylate synthase

ClanCL0649PseudoU_synth

External Links

ECOD PDB View: 1XPI RCSB PDB: 1XPI PDBe: 1XPI UniProt: P0AA39

Downloads

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