ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5s9tB1 - ECOD Domain | ECOD

ECOD/Domains/e5s9tB1

e5s9tB1

UID: 002886265

PDB

Range: B:358-485
PDB: 5S9T chain B(all domains)

Molecule: N(1),N(8)-bis(glutathionyl)spermidine reductase

3D Structure

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Related Domains

Browse other domains in Pyr_redox_dim →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupFAD/NAD-linked reduatases, dimerisation (C-terminal) domain(244.2)

TT-groupFAD/NAD-linked reduatases, dimerisation (C-terminal) domain(244.2.1)

FFamilyPyr_redox_dim(244.2.1.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
methyl (2~{S},4~{R})-1-(furan-2-ylcarbonyl)-4-oxidanyl-pyrrolidine-2-carboxylateGQJ

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02852Pyr_redox_dim

Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

ClanCL0608Reductase_C

External Links

ECOD PDB View: 5S9T RCSB PDB: 5S9T PDBe: 5S9T

Downloads

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