ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5s9zA2 - ECOD Domain | ECOD

ECOD/Domains/e5s9zA2

e5s9zA2

UID: 002886299

PDB

Range: A:3-168,A:286-357
PDB: 5S9Z chain A(all domains)

Molecule: N(1),N(8)-bis(glutathionyl)spermidine reductase

3D Structure

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Related Domains

Browse other domains in Pyr_redox_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyr_redox_2(2003.1.2.24)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Magnesium ionMG
metal
1-[4-(3-phenylpropyl)piperazin-1-yl]ethan-1-one

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5S9Z RCSB PDB: 5S9Z PDBe: 5S9Z

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.