ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7tbpA1 - ECOD Domain | ECOD

ECOD/Domains/e7tbpA1

e7tbpA1

UID: 002889439

PDB

Range: A:6-108
PDB: 7TBP chain A(all domains)

Molecule: Capsid protein p24

3D Structure

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Related Domains

Browse other domains in Gag_p17 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRetroviral matrix proteins(612)

HH-groupRetroviral matrix proteins(612.1)

TT-groupRetroviral matrix proteins(612.1.1)

FFamilyGag_p17(612.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Citric acid, Pentaethylene glycol)

Citric acidCIT
DrugBank DB04272
Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00540Gag_p17

gag gene protein p17 (matrix protein)

ClanCL0074Matrix

External Links

ECOD PDB View: 7TBP RCSB PDB: 7TBP PDBe: 7TBP

Downloads

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