ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1whuA1 - ECOD Domain | ECOD

ECOD/Domains/e1whuA1

e1whuA1

UID: 000002893

RepresentativePDB

Range: A:267-370
PDB: 1WHU chain A(all domains)
UniProt: Q8K1R3 (all domains)
Gene: Pnpt1

Molecule: polynucleotide phosphorylase; 3'-5' RNA exonuclease

3D Structure

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Related Domains

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Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupPolynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3(101.11)

TT-groupPolynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3(101.11.1)

FFamilyPNPase(101.11.1.1)

Pfam Families

Polyribonucleotide nucleotidyltransferase, RNA binding domain

External Links

ECOD PDB View: 1WHU RCSB PDB: 1WHU PDBe: 1WHU UniProt: Q8K1R3

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