ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7va3B1 - ECOD Domain | ECOD

ECOD/Domains/e7va3B1

e7va3B1

UID: 002894326

PDB

Range: B:1-180
PDB: 7VA3 chain B(all domains)

Molecule: Oligoribonuclease

3D Structure

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Related Domains

Browse other domains in RNase_T →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRNase_T(2484.1.1.13)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metalwithin 5 Å only

+ 1 additive (Imidazole)

ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer.

Pfam Families

PF00929RNase_T

Exonuclease

ClanCL0219RNase_H

External Links

ECOD PDB View: 7VA3 RCSB PDB: 7VA3 PDBe: 7VA3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.