ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7vc1B3 - ECOD Domain | ECOD

ECOD/Domains/e7vc1B3

e7vc1B3

UID: 002894905

PDB

Range: B:335-599
PDB: 7VC1 chain B(all domains)

Molecule: Prolyl-tRNA synthetase (ProRS)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_2b →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2b(314.1.1.2)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
1,2-ETHANEDIOLEDO

Pfam Families

PF00587tRNA-synt_2b

tRNA synthetase class II core domain (G, H, P, S and T)

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 7VC1 RCSB PDB: 7VC1 PDBe: 7VC1

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.