ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7xe3A5 - ECOD Domain | ECOD

ECOD/Domains/e7xe3A5

e7xe3A5

UID: 002896882

PDB

Range: A:209-236,A:262-364
PDB: 7XE3 chain A(all domains)

Molecule: Lysine-specific histone demethylase 1B

3D Structure

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Related Domains

Browse other domains in SWIRM →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilySWIRM(101.1.1.28)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (1,2-ETHANEDIOL, Citrate anion, Tetraethylene glycol)

1,2-ETHANEDIOLEDO
Citrate anionFLC
Tetraethylene glycolPG4

Pfam Families

SWIRM domain

ClanCL0123HTH

External Links

ECOD PDB View: 7XE3 RCSB PDB: 7XE3 PDBe: 7XE3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.