ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yslB1 - ECOD Domain | ECOD

ECOD/Domains/e1yslB1

e1yslB1

UID: 000290213

PDB

Range: B:1-166
PDB: 1YSL chain B(all domains)
UniProt: Q9FD71 (all domains)
Gene: mvaS

Molecule: HMG-CoA synthase

3D Structure

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Related Domains

Browse other domains in HMG_CoA_synt_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiolase-like(7581)

HH-groupThiolase-like(7581.1)

TT-groupThiolase-like(7581.1.1)

FFamilyHMG_CoA_synt_N(7581.1.1.5)

Ligands

in contact, ≤ 4 Å

Acetoacetic acidAAE
drugDrugBank DB01762
Coenzyme ACOA
drugDrugBank DB01992

+ 2 additives (Glycerin, Sulfate ion)

Pfam Families

PF01154HMG_CoA_synt_N

Hydroxymethylglutaryl-coenzyme A synthase N terminal

ClanCL0046Thiolase

External Links

ECOD PDB View: 1YSL RCSB PDB: 1YSL PDBe: 1YSL UniProt: Q9FD71

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.