ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2d2cP1 - ECOD Domain | ECOD

ECOD/Domains/e2d2cP1

e2d2cP1

UID: 000292282

PDB

Range: P:1-169,P:232-250
PDB: 2D2C chain P(all domains)
UniProt: P83793 (all domains)
Gene: petA

Molecule: Apocytochrome f

3D Structure

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Related Domains

Browse other domains in Apocytochr_F_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCommon fold of diphtheria toxin/transcription factors/cytochrome f(11.1.5)

FFamilyApocytochr_F_N(11.1.5.46)

Ligands

in contact, ≤ 4 Å

DibromothymoquinoneBNT
drugDrugBank DB04646
FerrohemeHEM
drugDrugBank DB18267within 5 Å only

Pfam Families

PF16639Apocytochr_F_N

Apocytochrome F, N-terminal

External Links

ECOD PDB View: 2D2C RCSB PDB: 2D2C PDBe: 2D2C UniProt: P83793

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.