ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1y5aT1 - ECOD Domain | ECOD

ECOD/Domains/e1y5aT1

e1y5aT1

UID: 000292449

PDB

Range: T:16-245
PDB: 1Y5A chain T(all domains)
UniProt: P00760 (all domains)
Gene: PRSS1

Molecule: Trypsin, cationic

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

2-O-(4'-AMIDINOPHENYL)-5-O-(3''-AMIDINOPHENYL)-1,4:3,6-DIANHYDRO-D-SORBITOLTL2
drugDrugBank DB04791
Calcium ionCA
metal

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 1Y5A RCSB PDB: 1Y5A PDBe: 1Y5A UniProt: P00760

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 3 additives (Glycerin, Imidazole, Sulfate ion)

GlycerinGOL
DrugBank DB09462
ImidazoleIMD
DrugBank DB03366
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.