ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yq4B2 - ECOD Domain | ECOD

ECOD/Domains/e1yq4B2

e1yq4B2

UID: 000292743

PDB

Range: B:6-114
PDB: 1YQ4 chain B(all domains)
UniProt: Q9YHT2 (all domains)
Gene: SDHB

Molecule: succinate dehydrogenase Ip subunit

3D Structure

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Related Domains

Browse other domains in Fer2_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyFer2_3(221.1.1.47)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
FE2/S2 (INORGANIC) CLUSTERFES

+ 1 additive (Glycerin)

Glycerin

Pfam Families

2Fe-2S iron-sulfur cluster binding domain

ClanCL0486Fer2

External Links

ECOD PDB View: 1YQ4 RCSB PDB: 1YQ4 PDBe: 1YQ4 UniProt: Q9YHT2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.