ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2b5nB1 - ECOD Domain | ECOD

ECOD/Domains/e2b5nB1

e2b5nB1

UID: 000296115

PDB

Range: B:387-707
PDB: 2B5N chain B(all domains)
UniProt: Q16531 (all domains)
Gene: DDB1

Molecule: damage-specific DNA binding protein 1

3D Structure

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Related Domains

Browse other domains in Beta-prop_RSE1_2nd →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyBeta-prop_RSE1_2nd(5.1.4.169)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Isopropyl alcohol)

Isopropyl alcoholIPA
DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF23726Beta-prop_RSE1_2nd

RSE1/DDB1/CPSF1 second beta-propeller

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 2B5N RCSB PDB: 2B5N PDBe: 2B5N UniProt: Q16531

Downloads

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