ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7wdbA2 - ECOD Domain | ECOD

ECOD/Domains/e7wdbA2

e7wdbA2

UID: 002969400

PDB

Range: A:359-664,A:706-708
PDB: 7WDB chain A(all domains)

Molecule: Short transient receptor potential channel 5

3D Structure

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Related Domains

Browse other domains in Ion_trans →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans(5054.1.1.2)

Ligands

in contact, ≤ 4 Å

Riluzole657
drugDrugBank DB00740
Calcium ionCA
metal
(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

External Links

ECOD PDB View: 7WDB RCSB PDB: 7WDB PDBe: 7WDB

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

PhosphatidylethanolaminePTY

Cholesterol hemisuccinateY01

[(2S)-1-oxidanyl-3-[(E)-tetradec-9-enoyl]oxy-propan-2-yl] (Z)-pentadec-9-enoateA1L8M

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.