ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e7ypyU1 - ECOD Domain | ECOD

ECOD/Domains/e7ypyU1

e7ypyU1

UID: 002969991

PDB

Range: U:7-85
PDB: 7YPY chain U(all domains)

Molecule: Cytochrome c oxidase subunit 6B1

3D Structure

Loading viewer...

Related Domains

Browse other domains in COX6B →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCytochrome c oxidase subunit h(540)

HH-groupCytochrome c oxidase subunit h(540.1)

TT-groupCytochrome c oxidase subunit h(540.1.1)

FFamilyCOX6B(540.1.1.1)

Ligands

in contact, ≤ 4 Å

(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATEPGV

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOL

Pfam Families

Cytochrome oxidase c subunit VIb

ClanCL0351CHCH

External Links

ECOD PDB View: 7YPY RCSB PDB: 7YPY PDBe: 7YPY

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.