ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8e9hD2 - ECOD Domain | ECOD

ECOD/Domains/e8e9hD2

e8e9hD2

UID: 002970370

PDB

Range: D:122-321
PDB: 8E9H chain D(all domains)

Molecule: NADH-quinone oxidoreductase subunit D

3D Structure

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Related Domains

Browse other domains in Complex1_49kDa →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025)

HH-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025.1)

TT-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025.1.1)

FFamilyComplex1_49kDa(4025.1.1.1)

Ligands

in contact, ≤ 4 Å

MENAQUINONE-9MQ9
Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00346Complex1_49kDa

Respiratory-chain NADH dehydrogenase, 49 Kd subunit

External Links

ECOD PDB View: 8E9H RCSB PDB: 8E9H PDBe: 8E9H

Downloads

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