ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7y7pB1 - ECOD Domain | ECOD

ECOD/Domains/e7y7pB1

e7y7pB1

UID: 002974386

PDB

Range: B:679-792
PDB: 7Y7P chain B(all domains)

Molecule: RNA-dependent RNA polymerase

3D Structure

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Related Domains

Browse other domains in RdRP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyRdRP(1.1.2.11)

Ligands

in contact, ≤ 4 Å

5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosineZAN
Calcium ionCA
metalwithin 5 Å only

+ 1 additive (Glycerin)

Glycerin

Pfam Families

RNA dependent RNA polymerase

External Links

ECOD PDB View: 7Y7P RCSB PDB: 7Y7P PDBe: 7Y7P

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.