ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8drdB1 - ECOD Domain | ECOD

ECOD/Domains/e8drdB1

e8drdB1

UID: 002977576

PDB

Range: B:1-106
PDB: 8DRD chain B(all domains)

Molecule: Soluble cytochrome b562

3D Structure

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Related Domains

Browse other domains in Cytochrom_B562 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupCytochromes(601.2)

TT-groupCytochromes(601.2.1)

FFamilyCytochrom_B562(601.2.1.6)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317
NICKEL (II) IONNI
metal

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

Pfam Families

PF07361Cytochrom_B562

Cytochrome b562

External Links

ECOD PDB View: 8DRD RCSB PDB: 8DRD PDBe: 8DRD

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(4r)-2-Methylpentane-2,4-DiolMPD

DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.