ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8agcA1 - ECOD Domain | ECOD

ECOD/Domains/e8agcA1

e8agcA1

UID: 002980710

PDB

Range: A:6-464
PDB: 8AGC chain A(all domains)

Molecule: Dolichyl-diphosphooligosaccharide--protein glycotransferase

3D Structure

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Related Domains

Browse other domains in STT3 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSTT3/PglB/AglB transmembrane domain(3352)

HH-groupSTT3/PglB/AglB transmembrane domain(3352.1)

TT-groupSTT3/PglB/AglB transmembrane domain(3352.1.1)

FFamilySTT3(3352.1.1.1)

Ligands

in contact, ≤ 4 Å

Palmitoyl-Linoleoyl PhosphatidylcholineCPL
drugDrugBank DB02306
N-AcetylglucosamineNAG
drugDrugBank DB00141

Pfam Families

Oligosaccharyl transferase STT3, N-terminal

ClanCL0111GT-C

External Links

ECOD PDB View: 8AGC RCSB PDB: 8AGC PDBe: 8AGC

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

2-[3,6-bis(dimethylamino)xanthen-9-yl]-5-methanoyl-benzoate323

phosphono [(3~{R},6~{E},10~{E})-3,7,11,15-tetramethylhexadeca-6,10,14-trienyl] hydrogen phosphateELU

PhosphatidylethanolaminePTY

MANGANESE (II) IONMN

metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.