ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8aguZ1 - ECOD Domain | ECOD

ECOD/Domains/e8aguZ1

e8aguZ1

UID: 002980807

PDB

Range: Z:77-128
PDB: 8AGU chain Z(all domains)

Molecule: Ubiquitin-60S ribosomal protein L40

3D Structure

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Related Domains

Browse other domains in Ribosomal_L40e →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRibosomal_L40e(375.1.1.6)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01020Ribosomal_L40e

Ribosomal L40e family

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 8AGU RCSB PDB: 8AGU PDBe: 8AGU

Downloads

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