ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8bd8A2 - ECOD Domain | ECOD

ECOD/Domains/e8bd8A2

e8bd8A2

UID: 002983442

PDB

Range: A:933-1087
PDB: 8BD8 chain A(all domains)

Molecule: E3 ubiquitin-protein ligase TRIM33

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
1,3-dimethylbenzimidazol-2-oneQCU

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 8BD8 RCSB PDB: 8BD8 PDBe: 8BD8

Downloads

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