ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8bdlI2 - ECOD Domain | ECOD

ECOD/Domains/e8bdlI2

e8bdlI2

UID: 002983490

PDB

Range: I:154-210
PDB: 8BDL chain I(all domains)

Molecule: von Hippel-Lindau disease tumor suppressor

3D Structure

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Related Domains

Browse other domains in VHL_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSOCS box-like(4215)

HH-groupSOCS box-like(4215.1)

TT-groupSOCS box-like(4215.1.1)

FFamilyVHL_C(4215.1.1.2)

Ligands

in contact, ≤ 4 Å

(2~{S},4~{R})-~{N}-[(1~{S})-1-[2-(2-methoxyethoxy)-4-(4-methyl-1,3-thiazol-5-yl)phenyl]ethyl]-1-[(2~{R})-3-methyl-2-(3-methyl-1,2-oxazol-5-yl)butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamideQF3
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

VHL box domain

ClanCL0642SOCS_box

External Links

ECOD PDB View: 8BDL RCSB PDB: 8BDL PDBe: 8BDL

Downloads

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