ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8bdsB1 - ECOD Domain | ECOD

ECOD/Domains/e8bdsB1

e8bdsB1

UID: 002983548

PDB

Range: B:16-112
PDB: 8BDS chain B(all domains)

Molecule: Elongin-C

3D Structure

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Related Domains

Browse other domains in Skp1_POZ →

Classification

AArchitecturea+b two layers(a.11)

XX-groupPOZ domain(226)

HH-groupPOZ domain(226.1)

TT-groupPOZ domain(226.1.1)

FFamilySkp1_POZ(226.1.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (1,2-ETHANEDIOL, Sulfate ion)

1,2-ETHANEDIOLEDO
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03931Skp1_POZ

Skp1 family, tetramerisation domain

ClanCL0033POZ

External Links

ECOD PDB View: 8BDS RCSB PDB: 8BDS PDBe: 8BDS

Downloads

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