ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8bvdD1 - ECOD Domain | ECOD

ECOD/Domains/e8bvdD1

e8bvdD1

UID: 002984216

PDB

Range: D:1-158
PDB: 8BVD chain D(all domains)

Molecule: Type 1 fimbrin D-mannose specific adhesin

3D Structure

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Related Domains

Browse other domains in FimH_man-bind →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCommon fold of diphtheria toxin/transcription factors/cytochrome f(11.1.5)

FFamilyFimH_man-bind(11.1.5.31)

Ligands

in contact, ≤ 4 Å

(2R,3S,4R,5S,6R)-2-(hydroxymethyl)-6-[(E)-3-quinolin-6-ylprop-2-enyl]oxane-3,4,5-triolRLO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09160FimH_man-bind

FimH, mannose binding

ClanCL0204Adhesin

External Links

ECOD PDB View: 8BVD RCSB PDB: 8BVD PDBe: 8BVD

Downloads

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