ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8c5cS1 - ECOD Domain | ECOD

ECOD/Domains/e8c5cS1

e8c5cS1

UID: 002984478

PDB

Range: S:245-441
PDB: 8C5C chain S(all domains)

Molecule: Tubulin alpha-1B chain

3D Structure

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Related Domains

Browse other domains in Tubulin_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupTubulin C-terminal domain-like(301.6)

TT-groupTubulin C-terminal domain-like(301.6.1)

FFamilyTubulin_C(301.6.1.1)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137within 5 Å only
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

PF03953Tubulin_C

Tubulin C-terminal domain

ClanCL0442Tubulin_C

External Links

ECOD PDB View: 8C5C RCSB PDB: 8C5C PDBe: 8C5C

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.