ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2fdaA1 - ECOD Domain | ECOD

ECOD/Domains/e2fdaA1

e2fdaA1

UID: 000298581

PDB

Range: A:16-244
PDB: 2FDA chain A(all domains)
UniProt: P03951 (all domains)
Gene: F11

Molecule: Coagulation factor XI

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

N~2~-(AMINOCARBONYL)-N~1~-{4-{[AMINO(IMINO)METHYL]AMINO}-1-[HYDROXY(1,3-THIAZOL-2-YL)METHYL]BUTYL}VALINAMIDE682

+ 2 additives (Sulfate ion, Bicarbonate ion)

Sulfate ionSO4
DrugBank DB14546
Bicarbonate ion

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 2FDA RCSB PDB: 2FDA PDBe: 2FDA UniProt: P03951

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.