ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8d9s51 - ECOD Domain | ECOD

ECOD/Domains/e8d9s51

e8d9s51

UID: 002986177

PDB

Range: 5:2-181
PDB: 8D9S chain 5(all domains)

Molecule: ADP ribosylation factor 1

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyArf(2004.1.1.16)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

ADP-ribosylation factor family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 8D9S RCSB PDB: 8D9S PDBe: 8D9S

Downloads

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