ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8dbeA1 - ECOD Domain | ECOD

ECOD/Domains/e8dbeA1

e8dbeA1

UID: 002986606

PDB

Range: A:2-162
PDB: 8DBE chain A(all domains)

Molecule: Ribose-phosphate pyrophosphokinase 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pribosyltran_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPRTase-like(7573)

HH-groupPRTase-like(7573.1)

TT-groupPRTase-like(7573.1.1)

FFamilyPribosyltran_N(7573.1.1.2)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
5-O-phosphono-alpha-D-ribofuranoseHSX
Magnesium ionMG

Pfam Families

PF13793Pribosyltran_N

N-terminal domain of ribose phosphate pyrophosphokinase

ClanCL0533PRTase-like

External Links

ECOD PDB View: 8DBE RCSB PDB: 8DBE PDBe: 8DBE

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Shown in the structure viewer. Drug annotations from DrugDomain.