ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8dq0C1 - ECOD Domain | ECOD

ECOD/Domains/e8dq0C1

e8dq0C1

UID: 002987864

PDB

Range: C:1-158
PDB: 8DQ0 chain C(all domains)

Molecule: RhlR protein

3D Structure

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Related Domains

Browse other domains in Autoind_bind →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilyAutoind_bind(223.1.1.7)

Ligands

in contact, ≤ 4 Å

4-(3-bromophenoxy)-N-[(3S)-2-oxothiolan-3-yl]butanamideK5G

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03472Autoind_bind

Autoinducer binding domain

ClanCL0161GAF

External Links

ECOD PDB View: 8DQ0 RCSB PDB: 8DQ0 PDBe: 8DQ0

Downloads

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